[PDF] Combinatorial pattern matching : 15th annual symposium, CPM 2004, Istanbul, Turkey, July 5-7, 2004 : proceedings - eBookmela

Combinatorial pattern matching : 15th annual symposium, CPM 2004, Istanbul, Turkey, July 5-7, 2004 : proceedings

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Author: Sahinalp, Suleyman Cenk, Muthukrishnan, S, Dogrusoz, Ugur

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Combinatorial Pattern Matching: 15th Annual Symposium, CPM 2004, Istanbul, Turkey, July 5-7, 2004. Proceedings
Author: Suleyman Cenk Sahinalp, S. Muthukrishnan, Ugur Dogrusoz
Published by Springer Berlin Heidelberg
ISBN: 978-3-540-22341-2
DOI: 10.1007/b98377

Table of Contents:

  • Sorting by Reversals in Subquadratic Time
  • Computational Problems in Perfect Phylogeny Haplotyping: Xor-Genotypes and Tag SNPs
  • Sorting by Length-Weighted Reversals: Dealing with Signs and Circularity
  • Optimizing Multiple Spaced Seeds for Homology Search
  • Approximate Labelled Subtree Homeomorphism
  • On the Average Sequence Complexity
  • Approximate Point Set Pattern Matching on Sequences and Planes
  • Finding Biclusters by Random Projections
  • Real-Time String Matching in Sublinear Space
  • On the k-Closest Substring and k-Consensus Pattern Problems
  • A Trie-Based Approach for Compacting Automata
  • A Simple Optimal Representation for Balanced Parentheses
  • Two Algorithms for LCS Consecutive Suffix Alignment
  • Efficient Algorithms for Finding Submasses in Weighted Strings
  • Maximum Agreement and Compatible Supertrees
  • Polynomial-Time Algorithms for the Ordered Maximum Agreement Subtree Problem
  • Small Phylogeny Problem: Character Evolution Trees
  • The Protein Sequence Design Problem in Canonical Model on 2D and 3D Lattices
  • A Computational Model for RNA Multiple Structural Alignment
  • Computational Design of New and Recombinant Selenoproteins

Includes bibliographical references and author index

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